Symmetry-breaking host–guest assembly in a hydrogen-bonded supramolecular system Shinnosuke Horiuchi, Takumi Yamaguchi, Jacopo Tessarolo, Hirotaka Tanaka, Eri Sakuda, Yasuhiro Arikawa, Eric Meggers, Guido H. Clever, Keisuke Umakoshi
Nature Communications, 14, 1, -, 2023
Field-stepwise-swept QCPMG solid-state 115In NMR of indium oxide Kazuhiko Yamada, Takumi Yamaguchi, Ryutaro Ohashi, Shinobu Ohki, Kenzo Deguchi, Kenjiro Hashi, Atsushi Goto, Tadashi Shimizu
Solid State Nuclear Magnetic Resonance, 109, 101688-101688, 2020
Remodeling of the Oligosaccharide Conformational Space in the Prebound State To Improve Lectin-Binding Affinity Tatsuya Suzuki, Saeko Yanaka, Tokio Watanabe, Gengwei Yan, Tadashi Satoh, Hirokazu Yagi, Takumi Yamaguchi, Koichi Kato
Biochemistry, 34, 34, 3180-3185, 2020
Dynamic Views of the Fc Region of Immunoglobulin G Provided by Experimental and Computational Observations. Saeko Yanaka, Rina Yogo, Rintaro Inoue, Masaaki Sugiyama, Satoru G Itoh, Hisashi Okumura, Yohei Miyanoiri, Hirokazu Yagi, Tadashi Satoh, Takumi Yamaguchi, Koichi Kato
Antibodies (Basel, Switzerland), 8, 3, -, 2019
分子をみる1(NMRほか) NMRと計算科学の統合による糖鎖の3次元構造ダイナミクスの解析
矢木 宏和, 鈴木 達哉, 谷中 冴子, 山口 拓実, 加藤 晃一
バイオイメージング, 27, 2, 48-48, 2018
NMR characterization of the dynamic conformations of oligosaccharides
K. Kato, H. Yagi, T. Yamaguchi
Modern Magnetic Resonance (G. Webb eds), Springer, 737-754, 2018
Conformational effects of N-glycan core fucosylation of immunoglobulin G Fc region on its interaction with Fcγ receptor IIIa. Sakae Y, Satoh T, Yagi H, Yanaka S, Yamaguchi T, Isoda Y, Iida S, Okamoto Y, Kato K
Scientific reports, 7, 1, 13780-13780, 2017
Hyper-Assembly of Self-Assembled Glycoclusters Mediated by Specific Carbohydrate-Carbohydrate Interactions Gengwei Yan, Takumi Yamaguchi, Tatsuya Suzuki, Saeko Yanaka, Sota Sato, Makoto Fujita, Koichi Kato
CHEMISTRY-AN ASIAN JOURNAL, 12, 9, 968-972, 2017
Conformational Analysis of a High-Mannose-Type Oligosaccharide Displaying Glucosyl Determinant Recognised by Molecular Chaperones Using NMR-Validated Molecular Dynamics Simulation. Tatsuya Suzuki, Megumi Kajino, Saeko Yanaka, Tong Zhu, Hirokazu Yagi, Tadashi Satoh, Takumi Yamaguchi, Koichi Kato
Chembiochem : a European journal of chemical biology, 18, 4, 396-401, 2017
Application of Site-Specific Spin Labeling for NMR Detecting Inhibitor-Induced Conformational Change of HIV-1 Reverse Transcriptase Supaporn Seetaha, Maho Yagi-Utsumi, Takumi Yamaguchi, Kentaro Ishii, Supa Hannongbua, Kiattawee Choowongkomon, Koichi Kato
CHEMMEDCHEM, 11, 4, 363-366, 2016
Backbone (1)H, (13)C, and (15)N resonance assignments of the Fc fragment of human immunoglobulin G glycoprotein. Hirokazu Yagi, Ying Zhang, Maho Yagi-Utsumi, Takumi Yamaguchi, Shigeru Iida, Yoshiki Yamaguchi, Koichi Kato
Biomolecular NMR assignments, 9, 2, 257-60, 2015
NMR characterization of HIV-1 reverse transcriptase binding to various non-nucleoside reverse transcriptase inhibitors with different activities Ratsupa Thammaporn, Maho Yagi-Utsumi, Takumi Yamaguchi, Pornthip Boonsri, Patchreenart Saparpakorn, Kiattawee Choowongkomon, Supanna Techasakul, Koichi Kato, Supa Hannongbua
SCIENTIFIC REPORTS, 5, 15806-, 2015
A Self-Assembled Spherical Complex Displaying a Gangliosidic Glycan Cluster Capable of Interacting with Amyloidogenic Proteins Sota Sato, Yutaka Yoshimasa, Daishi Fujita, Maho Yagi-Utsumi, Takumi Yamaguchi, Koichi Kato, Makoto Fujita
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 54, 29, 8435-8439, 2015
NMR-based structural validation of therapeutic antibody produced in Nicotiana benthamiana. Hirokazu Yagi, Noriho Fukuzawa, Yasushi Tasaka, Kouki Matsuo, Ying Zhang, Takumi Yamaguchi, Sachiko Kondo, Shiori Nakazawa, Noritaka Hashii, Nana Kawasaki, Takeshi Matsumura, Koichi Kato
Plant cell reports, 34, 6, 959-68, 2015
Stable isotope labeling of glycoprotein expressed in silkworms using immunoglobulin G as a test molecule. Hirokazu Yagi, Masatoshi Nakamura, Jun Yokoyama, Ying Zhang, Takumi Yamaguchi, Sachiko Kondo, Jun Kobayashi, Tatsuya Kato, Enoch Y Park, Shiori Nakazawa, Noritaka Hashii, Nana Kawasaki, Koichi Kato
Journal of biomolecular NMR, 62, 2, 157-67, 2015
A Self-Assembled Spherical Complex Displaying a Gangliosidic Glycan Cluster Capable of Interacting with Amyloidogenic Proteins Sota Sato, Yutaka Yoshimasa, Daishi Fujita, Maho Yagi-Utsumi, Takumi Yamaguchi, Koichi Kato, Makoto Fujita
Angewandte Chemie, 127, 29, 8555-8559, 2015
Conformational Dynamics of Oligosaccharides Characterized by Paramagnetism-Assisted NMR Spectroscopy in Conjunction with Molecular Dynamics Simulation Ying Zhang, Takumi Yamaguchi, Tadashi Satoh, Maho Yagi-Utsumi, Yukiko Kamiya, Yoshitake Sakae, Yuko Okamoto, Koichi Kato
BIOCHEMICAL ROLES OF EUKARYOTIC CELL SURFACE MACROMOLECULES, 842, 217-230, 2015
Conformational Dynamics of Oligosaccharides Characterized by Paramagnetism-Assisted NMR Spectroscopy in Conjunction with Molecular Dynamics Simulation Ying Zhang, Takumi Yamaguchi, Tadashi Satoh, Maho Yagi-Utsumi, Yukiko Kamiya, Yoshitake Sakae, Yuko Okamoto, Koichi Kato
BIOCHEMICAL ROLES OF EUKARYOTIC CELL SURFACE (MACROMOLECULES), 842, 217-230, 2015
A self-assembled, π-stacked complex as a finely-tunable magnetic aligner for biomolecular NMR applications. Sato S, Takeuchi R, Yagi-Utsumi M, Yamaguchi T, Yamaguchi Y, Kato K, Fujita M
Chemical communications (Cambridge, England), 51, 13, 2540-2543, 2015
Conformational characterization of a protein complex involving intrinsically disordered protein by small-angle neutron scattering using the inverse contrast matching method: a case study of interaction between alpha-synuclein and PbaB tetramer as a model chaperone Masaaki Sugiyama, Hirokazu Yagi, Takumi Yamaguchi, Kentaro Kumoi, Mitsuhiro Hirai, Yojiro Oba, Nobuhiro Sato, Lionel Porcar, Anne Martel, Koichi Kato
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 47, 430-435, 2014
Total synthesis and characterization of thielocin B1 as a protein-protein interaction inhibitor of PAC3 homodimer Takayuki Doi, Masahito Yoshida, Kosuke Ohsawa, Kazuo Shin-ya, Motoki Takagi, Yoshinori Uekusa, Takumi Yamaguchi, Koichi Kato, Takatsugu Hirokawa, Tohru Natsume
CHEMICAL SCIENCE, 5, 5, 1860-1868, 2014
A 3.5-nm coordination nanotube T Yamaguchi, S Tashiro, M Tominaga, M Kawano, T Ozeki, M Fujita
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 126, 35, 10818-10819, 2004